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The oxDNA coarse-grained model as a tool to simulate DNA origamiJonathan P.K. Doye, Hannah Fowler, Domen Prešern, Joakim Bohlin, Lorenzo Rovigatti, Flavio Romano, Petr Šulc, Chak Kui Wong, Ard A. Louis, John S. Schreck, Megan C. Engel, Michael Matthies, Erik Benson, Erik Poppleton and Benedict E.K. SnodinMethods in Molecular Biology; DNA origami: Methods and Protocols, submittedAbstractThis chapter introduces how to run molecular dynamic simulations for DNA origami using the oxDNA coarse-grained coarse-grained model.The full paper is available from arXiv. Data associated with this publication is available at the Oxford Research Archive. |